| Line 184: |
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| align="left" style="background:#f0f0f0;"|[[Media: Allpaths_D3_nopac.pdf | '''Misassemblies''']] |
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| align="left" style="background:#f0f0f0;"|[[Media: Allpaths_D3_nopac.pdf | '''Misassemblies''']] |
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| - |
| # misassemblies||5||19||11||10||17||9||7
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+ |
| # misassemblies||2||11||6||5||13||2||3
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| - |
|Misassembled contigs length ||1663585||2138844||1949937||1675149||2131766||2130729||1659817
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|Misassembled contigs length ||1663585||2138844||1949937||1675149||2131766||1812035||1659817
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| align="left" style="background:#f0f0f0;"|'''Mismatches''' |
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| align="left" style="background:#f0f0f0;"|'''Mismatches''' |
| Line 192: |
| - |
|# mismatches per 100kbp ||2.62||4.9||2.59||3.24||10.34||2.92||2.22
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|# mismatches per 100kbp ||2.16||4.43||2.07||3.2||10.34||2.21||1.74
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| - |
|# indels per 100kbp ||1.5||17.33||11.78||7.38||4.39||1.69||13.48
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+ |
|# indels per 100kbp ||1.5||2.29||1.6||1.5||2.69||1.6||1.93
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|# N's per 100kbp ||759.8||1714.74||1505.69||1609.26||1353.91||938.21||1268.03 |
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|# N's per 100kbp ||759.8||1714.74||1505.69||1609.26||1353.91||938.21||1268.03 |
| Line 198: |
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| align="left" style="background:#f0f0f0;"|'''Genome statistics''' |
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| align="left" style="background:#f0f0f0;"|'''Genome statistics''' |
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| - |
| Genome fraction (%)||98.798||97.204||98.624||98.477||98.059||98.324||98.23
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+ |
| Genome fraction (%)||98.777||97.199||98.241||98.431||98.033||98.31||98.168
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|- |
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| - |
| Duplication ratio ||1.022||1.019||1.047||1.027||1.061||1.044||1.032
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| Duplication ratio ||1.013||1.019||1.018||1.017||1.023||1.016||1.013
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| - |
| # genes||2271 + 15 part ||2239 + 33 part ||2275 + 15 part||2263+ 25 part ||2255 + 21 part ||2262 + 19 part ||2260 + 19 part
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| # genes||2269 + 17 part ||2239 + 33 part ||2275 + 18 part||2260+ 27 part ||2254 + 22 part ||2262 + 19 part ||2257 + 22 part
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|- |
|
|- |
| - |
| NGA50 ||403409||224016||397648||376923||313633||463639||483405
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+ |
| NGA50 ||468023||459198||467165||467048||286777||828148||124602
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| align="left" style="background:#f0f0f0;"|''' Running Time '''|| 19m ||53m ||19m ||20m ||18m ||19m || 22m |
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| align="left" style="background:#f0f0f0;"|''' Running Time '''|| 19m ||53m ||19m ||20m ||18m ||19m || 22m |
