Version Differences for S. pneumoniae

Revision as of 19 October 2013 02:31

(→Evaluation)

Revision as of 19 October 2013 02:52

(→Evaluation)

 |-
-								| # contigs||57||31||32||26
+								| # contigs||6||4||4||4
 |-
-								| Largest contig||3186675||3188995||1674993||3190277
+								| Largest contig||2135901||1663585||1671738||1664345
 |-
-								| Total length||4583750||4592561||4620837||4607723
+								| Total length||2144412||2161502||2160013||2156958
 |-
-								| N50||3186675||3188995||1492665||3190277
+								| N50||2135901||1663585||1671738||1664345
 |-
 | align="left" style="background:#f0f0f0;"|'''Misassemblies'''
-								| # misassemblies||6||9||17||27
+								| # misassemblies||19||5||11||9
 |-
-								|Misassembled contigs length ||4147900||4205887||2637662||4422750
+								|Misassembled contigs length ||2138844||1663585||1949937||2154315
 |-
 | align="left" style="background:#f0f0f0;"|'''Mismatches'''
-								|# mismatches per 100kbp ||4.23||5.81||7.49||10.76
+								|# mismatches per 100kbp ||4.9||2.62||2.59||3.33
 |-
-								|# indels per 100kbp ||3.57||5.64||4.72||8.94
+								|# indels per 100kbp ||17.33||1.5||11.78||14.39
 |-
-								|# N's per 100kbp ||149.31||120.74||197.84||812.74
+								|# N's per 100kbp ||1714.74||759.8||1505.69||994.27
 |-
 | align="left" style="background:#f0f0f0;"|'''Genome statistics'''
-								| Genome fraction (%)||98.789||99.45||99.468||98.896
+								| Genome fraction (%)||97.204||98.798||98.624||98.72
 |-
-								| Duplication ratio ||1.022||1.018||1.015||1.02
+								| Duplication ratio ||1.019||1.022||1.047||1.021
 |-
-								| # genes||4313 + 47 part　||4348 + 27 part　||4343 + 31 part　||4266 + 101 part
+								| # genes||2239 + 33 part　||2271 + 15 part　||2275 + 15 part　||2266 + 17 part
 |-
-								| NGA50 ||3180491||3182258||1487141||546353
+								| NGA50 ||224016||403409||397648||1533035
 |-
 |}