Version Differences for SCA

Line 1:
  Self-correction approach (SCA) was proposed in the [http://www.ncbi.nlm.nih.gov/pubmed/24034426 ref] (''Reducing assembly complexity of microbial genomes with single-molecule sequencin'', Genome Biology 2013).    Self-correction approach (SCA) was proposed in the [http://www.ncbi.nlm.nih.gov/pubmed/24034426 ref] (''Reducing assembly complexity of microbial genomes with single-molecule sequencin'', Genome Biology 2013). 
       
    + =DataSet1=  
    + We used all SMRT cells and randomly selected four and six SMRT cells three times for each, and access the correctness by Quast.  
       
       
    + ==Performance==  
    + {| {{table}} border="1"  
    + | align="center" style="background:#f0f0f0;"|'''Statistics without reference '''  
    + | align="center" style="background:#f0f0f0;"|'''All Data'''  
    + | align="center" style="background:#f0f0f0;"|'''4 SMRT cells : 1st Set'''  
    + | align="center" style="background:#f0f0f0;"|'''4 SMRT cells : 2nd Set'''  
    + | align="center" style="background:#f0f0f0;"|'''4 SMRT cells : 3rd Set'''  
    + | align="center" style="background:#f0f0f0;"|'''6 SMRT cells : 1st Set'''  
    + | align="center" style="background:#f0f0f0;"|'''6 SMRT cells : 2nd Set'''  
    + | align="center" style="background:#f0f0f0;"|'''6 SMRT cells : 3rd Set'''  
    + |-  
    + |# contigs||16||10||14||16||9||18||13  
    + |-  
    + |Largest contig||2 198 457||3 4848 77||1 936 831||1 948 632||2 104 087||1 169 224||1 439 551  
    + |-  
    + |Total length||4 808 733||4 706 800||4 705 398||4 745 036||4 741 512||4 814 718||4 749 785  
    + |-  
    + |N50||1 005 770 ||3 484 877||966 809||1 434 284||1 655 500||676 526||1 268 010  
    + |-  
    + | style="background:#f0f0f0;"| '''Misassemblies'''||||||||||||||  
    + |-  
    + |# misassemblies||19||9||12||15||14||17||11  
    + |-  
    + |Misassembled contigs length ||2 939 040||3 530 352||2 949 761||3 653 461||3 820 624||2 387 129||3 986 402  
    + |-  
    + | style="background:#f0f0f0;"| '''Mismatches'''||||||||||||||  
    + |-  
    + |# mismatches per 100kbp||0.8||0.43||0.58||1.36||0.15||0.95||0.58  
    + |-  
    + |# indels per 100kbp||5.71||2.98||4.45||9.56||1.77||8.02||6.88  
    + |-  
    + |# N's per 100kbp ||0||0||0||0||0||0||0  
    + |-  
    + | style="background:#f0f0f0;"| '''Genome Statistics'''||||||||||||||  
    + |-  
    + |Genome fraction(%) ||100||100||99.815||99.87||100||99.995||99.979  
    + |-  
    + |Duplication ratio ||1.037||1.016||1.017||1.025||1.022||1.038||1.025  
    + |-  
    + |# genes ||4494+3 part||4494+3 part||4480+7 part||4485+9 part||4494+3 part||4493+4 part||4492+5 part  
    + |-  
    + |NGA50 ||615 234||1 205 052||572 342||875 953||844 482||633 220||1 267 242  
    + |-  
    + |'''Running Time'''||19hr 06m||13hr 34m||13hr 21m||12hr 38m||21hr 28m||22hr 56m||22hr 07m  
    + |-  
    + |}