(→Dataset 5 (E. coli K-12 MG1655, 17 SMRT cells))
|
(→Dataset 5 (E. coli K-12 MG1655, 17 SMRT cells))
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Line 4: | |||
We randomly selected four, six and eight SMRT cells three times for each, and access the correctness by Quast. | We randomly selected four, six and eight SMRT cells three times for each, and access the correctness by Quast. | ||
- | ==Perfor== | + | ==Performance== |
{| {{table}} border="1" | {| {{table}} border="1" | ||
| align="center" style="background:#f0f0f0;"|'''Statistics without reference ''' | | align="center" style="background:#f0f0f0;"|'''Statistics without reference ''' | ||
Line 16: | |||
| align="center" style="background:#f0f0f0;"|'''8 SMRT cells : 2nd Set''' | | align="center" style="background:#f0f0f0;"|'''8 SMRT cells : 2nd Set''' | ||
| align="center" style="background:#f0f0f0;"|'''8 SMRT cells : 3rd Set''' | | align="center" style="background:#f0f0f0;"|'''8 SMRT cells : 3rd Set''' | ||
+ | | align="center" style="background:#f0f0f0;"|'''17 SMRT cells''' | ||
|- | |- | ||
- | |# contigs||5||10||4||11||7||8||6||10||5 | + | |# contigs||1||1||5||2||2||1||4||1||2||1 |
|- | |- | ||
- | |Largest contig||3 770 578||4 106 852||4 644 754||3 785 116||4 647 724||3 287 965||4 649 322||4 623 068||4 649 308 | + | |Largest contig||4 647 117||4 648 057||3 447 068||3 749 516||2 770 859||4 649 699||1 679 082||4 649 323||4 189 785||4 651 604 |
|- | |- | ||
- | |Total length||4 684 069||4 723 363||4 671 153||4 736 342||4 711 060||4 708 831||4 706 433||4 731 334||4 691 736 | + | |Total length||4 647 117||4 648 057||4 661 453||4 645 941||4 657 272||4 649 699||4 655 949||4 649 323||4 652 482||4 651 604 |
|- | |- | ||
- | |N50||3 770 578||4 106 852||4 644 754||3 785 116||4 647 724||3 287 965||4 649 322||4 623 068||4 649 308 | + | |N50||4 647 117||4 648 057||3 447 068||3 749 516||4 649 699||1 159 845||4 649 323||4 189 785||4 651 604 |
|- | |- | ||
| style="background:#f0f0f0;"| '''Misassemblies'''|||||||||||||||||| | | style="background:#f0f0f0;"| '''Misassemblies'''|||||||||||||||||| |