| Line 54: |
| |
| align="left" style="background:#f0f0f0;"|'''Website data''' |
|
| align="left" style="background:#f0f0f0;"|'''Website data''' |
| |
| align="left" style="background:#f0f0f0;"|'''Raw Data''' |
|
| align="left" style="background:#f0f0f0;"|'''Raw Data''' |
| - |
| align="left" style="background:#f0f0f0;"|'''Fractional Data'''
|
|
|
| - |
| align="left" style="background:#f0f0f0;"|'''50X coverage'''
|
|
|
| - |
| align="left" style="background:#f0f0f0;"|'''100X coverage'''
|
|
|
| |
|
|
|
| |
|- |
|
|- |
| - |
| # contigs||[[Media:alg_d1_web_nopac.fasta | 2]]||[[Media:alg_d1_raw_nopac.fasta | 1]]||[[Media:alg_d1_frac_nopac.fasta | 5]]||[[Media:alg_d1_50X_nopac.fasta | 3]]||[[Media:alg_d1_100X_onpac.fasta | 2]]
|
+ |
| # contigs||[[Media:spd_d1_web_nopac.fasta | 2]]||[[Media:spd_d1_raw_nopac.fasta | 1]]
|
| |
|- |
|
|- |
| - |
| Largest contig||4631220||4633080||4575759||4629108||4638312
|
+ |
| Largest contig||4631220||4633080
|
| |
|- |
|
|- |
| - |
| Total length||4633146||4633080||4698903||4633082||4640072
|
+ |
| Total length||4633146||4633080
|
| |
|- |
|
|- |
| - |
| N50||4631220||4633080||4575759||4629108||4638312
|
+ |
| N50||4631220||4633080
|
| |
|- |
|
|- |
| |
| align="left" style="background:#f0f0f0;"|[[Media: allpaths_D1_nopac.pdf | '''Misassemblies''']] |
|
| align="left" style="background:#f0f0f0;"|[[Media: allpaths_D1_nopac.pdf | '''Misassemblies''']] |
| Line 71: |
| - |
| # misassemblies||3||7||8||8||5
|
+ |
| # misassemblies||3||7
|
| |
|- |
|
|- |
| - |
|Misassembled contigs length ||4631220||4633080||4577746||4631095||4638312
|
+ |
|Misassembled contigs length ||4631220||4633080
|
| |
|- |
|
|- |
| |
| align="left" style="background:#f0f0f0;"|'''Mismatches''' |
|
| align="left" style="background:#f0f0f0;"|'''Mismatches''' |
| Line 77: |
| - |
|# mismatches per 100kbp ||1.19||1.42||2.84||2.52||2.26
|
+ |
|# mismatches per 100kbp ||1.19||1.42
|
| |
|- |
|
|- |
| - |
|# indels per 100kbp ||1.13||0.83||3.26||1.24||1.85
|
+ |
|# indels per 100kbp ||1.13||0.83
|
| |
|- |
|
|- |
| - |
|# N's per 100kbp ||533.22||1545.02||698.87||703.96||760.38
|
+ |
|# N's per 100kbp ||533.22||1545.02
|
| |
|- |
|
|- |
| |
| align="left" style="background:#f0f0f0;"|'''Genome statistics''' |
|
| align="left" style="background:#f0f0f0;"|'''Genome statistics''' |
| Line 85: |
| - |
| Genome fraction (%)||99.345||98.343||99.265||99.136||99.272
|
+ |
| Genome fraction (%)||99.345||98.343
|
| |
|- |
|
|- |
| - |
| Duplication ratio ||1.012||1.016||1.021||1.008||1.008
|
+ |
| Duplication ratio ||1.012||1.016
|
| |
|- |
|
|- |
| - |
| # genes||4465 + 11 part ||4395 + 31 part ||4460 + 14 part ||4451 + 13 part||4455 + 14 part
|
+ |
| # genes||4465 + 11 part ||4395 + 31 part
|
| |
|- |
|
|- |
| - |
| NGA50 ||3180483||687701||654008||2675325||694154
|
+ |
| NGA50 ||3180483||687701
|
| |
|- |
|
|- |
| - |
| align="left" style="background:#f0f0f0;"|''' Running Time '''|| 28m ||2hr 01m||31m ||28m || 32m
|
+ |
| align="left" style="background:#f0f0f0;"|''' Running Time '''|| 28m ||2hr 01m
|
| |
|- |
|
|- |
| |
|} |
|
|} |
