Version Differences for Wgs-8.2
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| | align="center" style="background:#f0f0f0;"|'''Miseq_d9''' | | align="center" style="background:#f0f0f0;"|'''Miseq_d9''' | ||
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| - | | # contigs||[[Media:spd_hb_1cell.fasta|15]]||[[Media:spd_hb_2cell.fasta|14]]||[[Media:spd_hb_3cell.fasta|12]]||[[Media:spd_hb_4cell.fasta|11]]||[[Media:spd_hb_17cell.fasta|6]]||[[Media:spd_hb_p4c2.fasta|6]] | + | | # contigs||[[Media:spd_hb_1cell.fasta|15]]||[[Media:spd_hb_2cell.fasta|14]]||[[Media:spd_hb_3cell.fasta|12]]||[[Media:spd_hb_4cell.fasta|11]]||[[Media:spd_hb_17cell.fasta|6]] |
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| - | | Largest contig||2498709||3196491||1522255||2216997||4644452||4644455 | + | | Largest contig||2498709||3196491||1522255||2216997||4644452 |
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| - | | Total length||4626443||4639784||4651072||4649795||4652420||4652423 | + | | Total length||4626443||4639784||4651072||4649795||4652420 |
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| - | | N50||2498709||3196491||1241619||1750947||4644452||4644455 | + | | N50||2498709||3196491||1241619||1750947||4644452 |
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| - | | style="background:#f0f0f0;"|[[Media: spade_hybrid.pdf| '''Misassemblies''']]|||||||||||| | + | | style="background:#f0f0f0;"|[[Media: spade_hybrid.pdf| '''Misassemblies''']]|||||||||| |
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| - | | # misassemblies||6||6||7||7||7||7 | + | | # misassemblies||6||6||7||7||7 |
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| - | | Misassembled contigs length||2498709||3196491||2501706||3967944||4644452||4644455 | + | | Misassembled contigs length||2498709||3196491||2501706||3967944||4644452 |
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| - | | style="background:#f0f0f0;"| Mismatches|||||||||||| | + | | style="background:#f0f0f0;"| Mismatches||||||||||| |
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| - | | # mismatches per 100 kbp||5.16||6.16||6.79||6.81||6.79||6.79 | + | | # mismatches per 100 kbp||5.16||6.16||6.79||6.81||6.79 |
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| - | | # indels per 100 kbp||0.54||0.54||0.58||0.58||0.67||0.58 | + | | # indels per 100 kbp||0.54||0.54||0.58||0.58||0.67 |
| |- | |- | ||
| - | | # N's per 100 kbp||0||0||0||0||0||0 | + | | # N's per 100 kbp||0||0||0||0||0 |
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| - | | style="background:#f0f0f0;"| Genome statistics|||||||||||| | + | | style="background:#f0f0f0;"| Genome statistics|||||||||| |
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| - | | Genome fraction (%)|||99.411||99.756||100||99.976||100||100 | + | | Genome fraction (%)|||99.411||99.756||100||99.976||100 |
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| - | | Duplication ratio||1.001||1.001||1.001||1.001||1.001||1.001 | + | | Duplication ratio||1.001||1.001||1.001||1.001||1.001 |
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| - | | # genes||4479 + 3 part||4485 + 4 part||4492 + 5 part||4492 + 5 part||4495 + 2 part||4495 + 2 part | + | | # genes||4479 + 3 part||4485 + 4 part||4492 + 5 part||4492 + 5 part||4495 + 2 part |
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| | NGA50|||692561||1041186||889325||1278976||3026419||3026422 | | NGA50|||692561||1041186||889325||1278976||3026419||3026422 | ||
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| - | | align="left" style="background:#f0f0f0;"|''' Running Time '''||2hr 34m ||2hr 36m|| 2hr 40m||2hr 35m||2hr 46m||2hr 33m | + | | align="left" style="background:#f0f0f0;"|''' Running Time '''||2hr 34m ||2hr 36m|| 2hr 40m||2hr 35m||2hr 46m |
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| |} | |} | ||