(→TEST)
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(→TEST)
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Line 15: | |||
| Total length||4686657||4685972||4678733||4653153||4674706 | | Total length||4686657||4685972||4678733||4653153||4674706 | ||
|- | |- | ||
- | | N50||2498709||3196491||1241619||1750947||4644452 | + | | N50||564692||981448||3385118||4461262||4649343 |
|- | |- | ||
| style="background:#f0f0f0;"|[[Media: spade_hybrid.pdf| '''Misassemblies''']]|||||||||| | | style="background:#f0f0f0;"|[[Media: spade_hybrid.pdf| '''Misassemblies''']]|||||||||| | ||
Line 21: | |||
- | | # misassemblies||6||6||7||7||7 | + | | # misassemblies||57||11||10||9||11 |
|- | |- | ||
- | | Misassembled contigs length||2498709||3196491||2501706||3967944||4644452 | + | | Misassembled contigs length||1091536||3501620||4397319||4461262||4661093 |
|- | |- | ||
| style="background:#f0f0f0;"| Mismatches||||||||||| | | style="background:#f0f0f0;"| Mismatches||||||||||| | ||
Line 27: | |||
- | | # mismatches per 100 kbp||5.16||6.16||6.79||6.81||6.79 | + | | # mismatches per 100 kbp||2.26||1.64||0.91||2.07||2 |
|- | |- | ||
- | | # indels per 100 kbp||0.54||0.54||0.58||0.58||0.67 | + | | # indels per 100 kbp||0.63||0.32||0.24||0.3||0.47 |
|- | |- | ||
| # N's per 100 kbp||0||0||0||0||0 | | # N's per 100 kbp||0||0||0||0||0 | ||
Line 33: | |||
| style="background:#f0f0f0;"| Genome statistics|||||||||| | | style="background:#f0f0f0;"| Genome statistics|||||||||| | ||
|- | |- | ||
- | | Genome fraction (%)|||99.411||99.756||100||99.976||100 | + | | Genome fraction (%)|||99.922||100||100||100||100 |
|- | |- | ||
- | | Duplication ratio||1.001||1.001||1.001||1.001||1.001 | + | | Duplication ratio||1.011||1.01||1.008||1.003||1.008 |
|- | |- | ||
- | | # genes||4479 + 3 part||4485 + 4 part||4492 + 5 part||4492 + 5 part||4495 + 2 part | + | | # genes||4482 + 13 part||4495 + 2 part||4495 + 2 part||4494 + 3 part||4495 + 2 part |
|- | |- | ||
- | | NGA50|||692561||1041186||889325||1278976||3026419 | + | | NGA50||293226||947955||949288||3026415||3026412 |
|- | |- | ||
- | | align="left" style="background:#f0f0f0;"|''' Running Time '''||2hr 34m ||2hr 36m|| 2hr 40m||2hr 35m||2hr 46m | + | | align="left" style="background:#f0f0f0;"|''' Running Time '''||6hr 8m ||9hr 52m||10hr 24m||11hr 57m||12hr 52m |
|- | |- | ||
|} | |} |