SPAdes - D5
- Evaluated by QUAST
- QUAST (QUAST v2.3)
- Running QUAST requires Ec_gene_list and NC_000913.fna. There are 4497 genes in total.
- Score with QUAST: With PacBio Long Reads [ more detail]
| Basic statistics | Website data | |
| # contigs | 1 | |
| Largest contig | 4638970 | |
| Total length | 4638970 | |
| N50 | 4638970 | 4625005 |
| Misassemblies | ||
| # misassemblies | 1 | |
| Misassembled contigs length | 4638970 | |
| Mismatches | ||
| # mismatches per 100kbp | 0.11 | |
| # indels per 100kbp | 0.09 | |
| # N's per 100kbp | 0 | |
| Genome statistics | ||
| Genome fraction (%) | 99.983 | |
| Duplication ratio | 1 | |
| # genes | 4494 + 1 part | |
| NGA50 | 4638970 | |
| Running Time | 42m |
Misassemblies for Adobe reader.