Basic statistics | Website data | Raw Data |
# contigs | 1 | 14 |
Largest contig | 4638970 | 4625005 |
Total length | 4638970 | 4652215 |
N50 | 4638970 | 4625005 |
Misassemblies | ||
# misassemblies | 1 | 5 |
Misassembled contigs length | 4638970 | 4625005 |
Mismatches | ||
# mismatches per 100kbp | 0.11 | 1.06 |
# indels per 100kbp | 0.09 | 0.61 |
# N's per 100kbp | 0 | 282.94 |
Genome statistics | ||
Genome fraction (%) | 99.983 | 99.418 |
Duplication ratio | 1 | 1.013 |
# genes | 4494 + 1 part | 4471 + 2 part t |
NGA50 | 4638970 | 2714032 |
Running Time | 42m | 2hr 35m |
Misassemblies for Adobe reader.
Basic statistics | Website data | Raw Data |
# contigs | 2 | 1 |
Largest contig | 4631220 | 4633080 |
Total length | 4633146 | 4633080 |
N50 | 4631220 | 4633080 |
Misassemblies | ||
# misassemblies | 3 | 7 |
Misassembled contigs length | 4631220 | 4633080 |
Mismatches | ||
# mismatches per 100kbp | 1.19 | 1.42 |
# indels per 100kbp | 1.13 | 0.83 |
# N's per 100kbp | 533.22 | 1545.02 |
Genome statistics | ||
Genome fraction (%) | 99.345 | 98.343 |
Duplication ratio | 1.012 | 1.016 |
# genes | 4465 + 11 part | 4395 + 31 part |
NGA50 | 3180483 | 687701 |
Running Time | 28m | 2hr 01m |
Misassemblies for Adobe reader.