RunCA

Revision as of 20 August 2013 22:05 by admin (Comments | Contribs) n

Short reads: 100X, long reads: 200X, w/wo genome size

pacBioToCA -l viaMiseq -s pacbio.spec  -t 10 -partitions 200 fastqFile=filtered_subreads.200X.fastq.bz2 miseq.100X.frg.bz2

pacBioToCA -l viaMiseq -s pacbio.spec  -t 10 -partitions 200 fastqFile=filtered_subreads.200X.fastq.bz2 genomeSize=4650000 miseq.100X.frg.bz2