(→Long reads)
|
(→Assemblies with short reads only)
|
Line 22: | |||
17 SMRT Cells for E. coli MG1655 were downloaded (details in [[Data]] and [[Read Depths]]). | 17 SMRT Cells for E. coli MG1655 were downloaded (details in [[Data]] and [[Read Depths]]). | ||
= Assemblies with short reads only = | = Assemblies with short reads only = | ||
- | Abyss, Edena, SPAdes, SOAPdenovo2, Velvet, CISA (Note at: 20130807_MG1655_s1s2_with_verious_Assemblers) | + | Abyss, Edena, SPAdes, SOAPdenovo2, Velvet, CISA (Note at: 20130718_MiSeq_with_verious_Assemblers) |
MaSuRCA (note at: MaSuRCA assembler) | MaSuRCA (note at: MaSuRCA assembler) | ||
= PacBio corrected reads (PBcR) = | = PacBio corrected reads (PBcR) = | ||
To correct the PacBio CLR with raw short reads: | To correct the PacBio CLR with raw short reads: |