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| = Datasets employed in this study = | = Datasets employed in this study = | ||
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| - | We have used <span style="color:#FF0000;background-color:#ffffcc;">[http://www.broadinstitute.org/software/allpaths-lg/blog ALLPATHS-LG] [ftp://ftp.broadinstitute.org/pub/crd/ALLPATHS/Release-LG/latest_source_code/LAST_VERSION_THAT_DOESNT_REQUIRE_GCC_4.7.tar.gz v44837]</span> and <span style="color:#FF0000;background-color:#ffffcc;">[http://bioinf.spbau.ru/spades SPAdes][http://bioinf.spbau.ru/content/spades-download-form v3.1.0]</span> to assemble three bacterial genomes: [[E. coli]], [[R. sphaeroides]], and [[S. pneumoniae]]. The sequencing reads for these three genome assemblies are summarized in the following table (<span style="color:#FF0000;background-color:#ffffcc;">D1-D3</span>). | + | We have used <span style="color:#FF0000;background-color:#ffffcc;">[http://www.broadinstitute.org/software/allpaths-lg/blog ALLPATHS-LG] ([ftp://ftp.broadinstitute.org/pub/crd/ALLPATHS/Release-LG/latest_source_code/LAST_VERSION_THAT_DOESNT_REQUIRE_GCC_4.7.tar.gz v44837])</span> and <span style="color:#FF0000;background-color:#ffffcc;">[http://bioinf.spbau.ru/spades SPAdes][http://bioinf.spbau.ru/content/spades-download-form v3.1.0]</span> to assemble three bacterial genomes: [[E. coli]], [[R. sphaeroides]], and [[S. pneumoniae]]. The sequencing reads for these three genome assemblies are summarized in the following table (<span style="color:#FF0000;background-color:#ffffcc;">D1-D3</span>). |
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