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ALLPATHS-LG
E. coli
R. sphaeroides
S. pneumoniae
PBcR pipeline
Data
Read Depths
pacBioToCA
runCA
wgs-8.2
SPAdes
E. coli
R. sphaeroides
S. pneumoniae
Hybrid
SSPACE-longread
Result
Non-hybrid assembly
Pacbio Data
HGAP
PBcR pipeline
wgs-8.2
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6 January 2015
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PBcR
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Performance
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(
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PBcR
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Dataset 6 (E.coli K-12 MG1655, 8 SMRT cells)
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(
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PBcR
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PBcR
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(
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PBcR
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(
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PBcR
. . (+75) . .
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31 December 2014
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Pacbio Data
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Dataset 8, P. heparinus DSM2366, 7 SMRT cells
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(
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Pacbio Data
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Randomly Selected Three SMRT cells
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(
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Pacbio Data
. . (+869) . .
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Dataset 7, M. ruber DSM1279, 4 SMRT cells
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(
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Pacbio Data
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Randomly Selected Three SMRT cells
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