Recent Changes

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Changes as of 6 July 2025 07:55. (RSS Feed)

20 November 2014

(diff) (history) 01:23 Pacbio Data . . (+192) . . admin (Comments | Contribs) (→Third Set)
(diff) (history) 01:22 Pacbio Data . . (+193) . . admin (Comments | Contribs) (→Second Set)
(diff) (history) 01:20 Pacbio Data . . (+214) . . admin (Comments | Contribs) (→First Set)
(diff) (history) 01:12 Pacbio Data . . (+190) . . admin (Comments | Contribs) (→Third Set)
(diff) (history) 01:10 Pacbio Data . . (+190) . . admin (Comments | Contribs) (→Second Set)
(diff) (history) 01:07 Pacbio Data . . (+213) . . admin (Comments | Contribs) (→First Set)
(diff) (history) 01:05 Pacbio Data . . (+191) . . admin (Comments | Contribs) (→Third Set)
(diff) (history) 01:03 Pacbio Data . . (-1) . . admin (Comments | Contribs) (→First Set)
(diff) (history) 01:01 Pacbio Data . . (+191) . . admin (Comments | Contribs) (→Second Set)
(diff) (history) 01:00 Pacbio Data . . (+214) . . admin (Comments | Contribs) (→First Set)

4 September 2014

(diff) (history) 01:23 E. coli . . (-264) . . admin (Comments | Contribs) (→Fractional data)
(diff) (history) 01:22 E. coli . . (-1) . . admin (Comments | Contribs) (→Fractional data)
(diff) (history) 01:22 E. coli . . (+2) . . admin (Comments | Contribs) (→Fractional data)
(diff) (history) 01:21 E. coli . . (+3) . . admin (Comments | Contribs) (→Fractional data)
(diff) (history) 01:21 E. coli . . (+676) . . admin (Comments | Contribs) (→Fractional data)
(diff) (history) 01:15 E. coli . . (+4) . . admin (Comments | Contribs) (→Fractional data)
(diff) (history) 01:15 E. coli . . (+263) . . admin (Comments | Contribs) (→Fractional data)

30 August 2014

(diff) (history) 01:59 SSPACE . . (+2,161) . . admin (Comments | Contribs) (→Evaluation)

29 August 2014

(diff) (history) 01:50 E. coli . . (-1) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 01:49 E. coli . . (-2) . . admin (Comments | Contribs) (→Evaluation)

26 August 2014

(diff) (history) 03:00 Home . . (-54) . . admin (Comments | Contribs) (→Workflow)
(Upload log) 02:58 . . admin (Comments | Contribs) File File:Figure 1.png uploaded
(diff) (history) 02:58 Home . . (+16) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 02:58 Home . . (+22) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 02:50 Home . . (+578) . . admin (Comments | Contribs)
(diff) (history) 02:17 Home . . (-21) . . admin (Comments | Contribs)
(Upload log) 02:16 . . admin (Comments | Contribs) File File:Workflow.jpg uploaded
(diff) (history) 02:13 Home . . (+24) . . admin (Comments | Contribs)

22 August 2014

(diff) (history) 02:06 PBcR pipeline . . (+82) . . admin (Comments | Contribs)
(diff) (history) 02:04 HGAP . . (+6) . . admin (Comments | Contribs) (→Postprocess by discarding lower-case bases)
(Upload log) 01:59 . . admin (Comments | Contribs) File File:HGAP3 D9.pdf uploaded
(diff) (history) 01:56 HGAP . . (+1) . . admin (Comments | Contribs) (→Postprocess by discarding lower-case bases)
(diff) (history) 01:48 HGAP . . (+91) . . admin (Comments | Contribs) (→HGAP 3.0 with Dataset 9)
(Upload log) 01:45 . . admin (Comments | Contribs) File File:hgap3 d9 all.fa uploaded
(diff) (history) 01:44 HGAP . . (0) . . admin (Comments | Contribs) (→Postprocess by discarding lower-case bases)
(diff) (history) 01:36 Home . . (-4) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 01:35 Home . . (-9) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 01:34 PBcR pipeline . . (+4) . . admin (Comments | Contribs) (→wgs-8.2 Performance)
(diff) (history) 01:34 PBcR pipeline . . (+8) . . admin (Comments | Contribs) (→Performance)
(diff) (history) 01:18 HGAP . . (+34) . . admin (Comments | Contribs) (→HGAP 3.0 with Dataset 9)
(diff) (history) 01:17 HGAP . . (+15) . . admin (Comments | Contribs) (→HGAP 3.0)
(diff) (history) 01:16 HGAP . . (+11) . . admin (Comments | Contribs) (→Postprocess by discarding lower-case bases)
(diff) (history) 01:15 HGAP . . (+1,701) . . admin (Comments | Contribs) (→Postprocess by discarding lower-case bases)
(diff) (history) 01:11 HGAP . . (+4) . . admin (Comments | Contribs) (→Postprocess by discarding lower-case bases)
(diff) (history) 00:58 HGAP . . (+38) . . admin (Comments | Contribs) (→Dataset 9 (E. coli K-12, P4-C2 chemistry, 20 Kbp, 1 SMRT cell))
(diff) (history) 00:46 PBcR pipeline . . (+15) . . admin (Comments | Contribs) (→Performance)
(diff) (history) 00:30 PBcR pipeline . . (-5) . . admin (Comments | Contribs) (→Performance)
(diff) (history) 00:29 PBcR pipeline . . (-5) . . admin (Comments | Contribs) (→Performance)
(Upload log) 00:28 . . admin (Comments | Contribs) File File:pbcr pipeline d9.pdf uploaded
(Upload log) 00:12 . . admin (Comments | Contribs) File File:pbcr pipeline d9.fa uploaded
(diff) (history) 00:06 PBcR pipeline . . (+115) . . admin (Comments | Contribs)
(diff) (history) 00:05 PBcR pipeline . . (-1) . . admin (Comments | Contribs)
(diff) (history) 00:05 PBcR pipeline . . (+118) . . admin (Comments | Contribs) (→Dataset 9 (E. coli K-12, P4-C2 chemistry, 20 Kbp, 1 SMRT cell))
(diff) (history) 00:00 PBcR pipeline . . (+20) . . admin (Comments | Contribs) (→Dataset 9 (E. coli K-12, P4-C2 chemistry, 20 Kbp, 1 SMRT cell))

21 August 2014

(diff) (history) 23:59 PBcR pipeline . . (+863) . . admin (Comments | Contribs) (→Dataset 9 (E. coli K-12, P4-C2 chemistry, 20 Kbp, 1 SMRT cell))

19 August 2014

(Upload log) 21:18 . . admin (Comments | Contribs) File File:sspace summary.pdf uploaded
(Upload log) 21:17 . . admin (Comments | Contribs) File File:spades hb summary.pdf uploaded
(Upload log) 21:17 . . admin (Comments | Contribs) File File:spades d3 nopac summary.pdf uploaded
(Upload log) 21:16 . . admin (Comments | Contribs) File File:spades d3 summary.pdf uploaded
(Upload log) 21:16 . . admin (Comments | Contribs) File File:spades d2 nopac summary.pdf uploaded
(Upload log) 21:16 . . admin (Comments | Contribs) File File:spades d2 summary.pdf uploaded
(Upload log) 21:09 . . admin (Comments | Contribs) File File:spades d1 nopac summary.pdf uploaded
(Upload log) 21:08 . . admin (Comments | Contribs) File File:spades d1 r2cat.pdf uploaded
(diff) (history) 21:07 SPAdes - D1 and D5 . . (-2) . . admin (Comments | Contribs) (→Evaluation)
(Upload log) 20:48 . . admin (Comments | Contribs) File File:spades d1 summary.pdf uploaded
(Upload log) 20:45 . . admin (Comments | Contribs) File File:sspace.pdf uploaded
(Upload log) 20:45 . . admin (Comments | Contribs) File File:spade hybrid.pdf uploaded
(Upload log) 20:45 . . admin (Comments | Contribs) File File:spdes D3 nopac.pdf uploaded
(Upload log) 20:45 . . admin (Comments | Contribs) File File:spades D3.pdf uploaded
(Upload log) 20:45 . . admin (Comments | Contribs) File File:spades D2 nopac,pdf.pdf uploaded
(Upload log) 20:44 . . admin (Comments | Contribs) File File:spades D2.pdf uploaded
(Upload log) 20:16 . . admin (Comments | Contribs) File File:spades D1 nopac.pdf uploaded
(Upload log) 20:14 . . admin (Comments | Contribs) File File:spades d1.pdf uploaded
(diff) (history) 02:35 Home . . (+78) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 02:34 Home . . (+6) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 02:33 Home . . (+2) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 02:32 Home . . (+2) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 02:32 Home . . (+2) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 02:30 HGAP . . (0) . . admin (Comments | Contribs) (→Hierarchical genome-assembly process)
(diff) (history) 02:30 HGAP . . (+3) . . admin (Comments | Contribs) (→Hierarchical genome-assembly process)
(diff) (history) 02:27 Home . . (0) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 02:27 Home . . (+5) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 02:25 Home . . (+78) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 02:24 Home . . (-4) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 02:23 Home . . (+4) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 02:22 Home . . (+56) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 02:20 Home . . (+133) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 02:18 Home . . (+32) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 02:17 Home . . (-2) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 02:16 Home . . (+60) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 02:16 Home . . (-136) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 02:15 Home . . (+136) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 00:20 SSPACE . . (+70) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 00:20 SPAdes - hybrid . . (+73) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 00:19 SSPACE . . (+28) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 00:19 SPAdes - hybrid . . (+6) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 00:18 SPAdes - hybrid . . (+28) . . admin (Comments | Contribs) (→Evaluation)

18 August 2014

(diff) (history) 22:02 PBcR pipeline . . (+21) . . admin (Comments | Contribs) (→Dataset 8 (P. heparinus DSM1279, 7 SMRT cells))
(diff) (history) 22:01 PBcR pipeline . . (+21) . . admin (Comments | Contribs) (→Dataset 9 (E. coli K-12, P4-C2 chemistry, 20 Kbp, 1 SMRT cell))
(diff) (history) 22:01 PBcR pipeline . . (+21) . . admin (Comments | Contribs) (→Dataset 7, (M. ruber DSM1279, 4 SMRT cells))
(diff) (history) 22:01 PBcR pipeline . . (+21) . . admin (Comments | Contribs) (→Dataset 6 (E.coli K-12 MG1655, 8 SMRT cells))
(diff) (history) 22:00 PBcR pipeline . . (+21) . . admin (Comments | Contribs) (→Dataset 5 (E. coli K-12 MG1655, 17 SMRT cells))
(diff) (history) 21:59 HGAP . . (+11) . . admin (Comments | Contribs) (→Postprocess by discarding lower-case bases)
(diff) (history) 21:58 HGAP . . (+11) . . admin (Comments | Contribs) (→Postprocess by discarding lower-case bases)
(diff) (history) 21:58 HGAP . . (+11) . . admin (Comments | Contribs) (→Postprocess by discarding lower-case bases)
(diff) (history) 21:58 HGAP . . (+11) . . admin (Comments | Contribs) (→Postprocess by discarding lower-case bases)
(diff) (history) 21:57 HGAP . . (+11) . . admin (Comments | Contribs) (→Postprocess by discarding lower-case bases)
(diff) (history) 21:54 SSPACE . . (+10) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:52 SSPACE . . (+14) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:51 SSPACE . . (+107) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:48 SSPACE . . (+60) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:47 SPAdes - hybrid . . (+8) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:46 SPAdes - hybrid . . (+124) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:43 SPAdes - hybrid . . (+58) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:43 SPAdes - D3 . . (+126) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:42 SPAdes - D2 . . (+126) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:41 SPAdes - D1 and D5 . . (+65) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:41 SPAdes - D1 and D5 . . (+59) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:39 RunCA . . (+14) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:38 PacBioToCA . . (+28) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:37 Read Depths . . (+42) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:36 Read Depths . . (+14) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:35 S. pneumoniae . . (0) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:35 R. sphaeroides . . (0) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:32 E. coli . . (0) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:23 E. coli . . (0) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:21 E. coli . . (0) . . admin (Comments | Contribs) (→Evaluation)

16 August 2014

(Upload log) 03:24 . . admin (Comments | Contribs) File File:pbcr d9 all.fa uploaded
(Upload log) 03:24 . . admin (Comments | Contribs) File File:pbcr d8 rg4 3.fa uploaded
(Upload log) 03:24 . . admin (Comments | Contribs) File File:pbcr d8 rg4 2.fa uploaded
(Upload log) 03:23 . . admin (Comments | Contribs) File File:pbcr d8 rg4 1.fa uploaded
(Upload log) 03:23 . . admin (Comments | Contribs) File File:pbcr d8 all.fa uploaded
(Upload log) 03:23 . . admin (Comments | Contribs) File File:pbcr d7 all.fa uploaded
(Upload log) 03:22 . . admin (Comments | Contribs) File File:pbcr d6 rg6 3.fa uploaded
(Upload log) 03:22 . . admin (Comments | Contribs) File File:pbcr d6 rg6 2.fa uploaded
(Upload log) 03:22 . . admin (Comments | Contribs) File File:pbcr d6 rg6 1.fa uploaded
(Upload log) 03:22 . . admin (Comments | Contribs) File File:pbcr d6 rg4 3.fa uploaded
(Upload log) 03:22 . . admin (Comments | Contribs) File File:pbcr d6 rg4 2.fa uploaded
(Upload log) 03:21 . . admin (Comments | Contribs) File File:pbcr d6 rg4 1.fa uploaded
(Upload log) 03:21 . . admin (Comments | Contribs) File File:pbcr d6 all.fa uploaded
(Upload log) 03:21 . . admin (Comments | Contribs) File File:pbcr d5 rg8 3.fa uploaded
(Upload log) 03:21 . . admin (Comments | Contribs) File File:pbcr d5 rg8 2.fa uploaded
(Upload log) 03:21 . . admin (Comments | Contribs) File File:pbcr d5 rg8 1.fa uploaded
(Upload log) 03:20 . . admin (Comments | Contribs) File File:pbcr d5 rg6 3.fa uploaded
(Upload log) 03:20 . . admin (Comments | Contribs) File File:pbcr d5 rg6 2.fa uploaded
(Upload log) 03:20 . . admin (Comments | Contribs) File File:pbcr d5 rg6 1.fa uploaded
(Upload log) 03:20 . . admin (Comments | Contribs) File File:pbcr d5 rg4 3.fa uploaded
(Upload log) 03:20 . . admin (Comments | Contribs) File File:pbcr d5 rg4 2.fa uploaded
(Upload log) 03:19 . . admin (Comments | Contribs) File File:pbcr d5 rg4 2.fa uploaded
(Upload log) 03:19 . . admin (Comments | Contribs) File File:pbcr d5 rg4 1.fa uploaded
(Upload log) 03:19 . . admin (Comments | Contribs) File File:pbcr d5 all.fa uploaded
(Upload log) 03:17 . . admin (Comments | Contribs) File File:spd sspace p4c2.fasta uploaded
(Upload log) 03:17 . . admin (Comments | Contribs) File File:spd sspace 17cell.fasta uploaded
(Upload log) 03:17 . . admin (Comments | Contribs) File File:spd sspace 4cell.fasta uploaded

Recent Changes

12 December 2014

11 December 2014

8 December 2014

26 November 2014

20 November 2014

4 September 2014

30 August 2014

29 August 2014

26 August 2014

22 August 2014

21 August 2014

19 August 2014

18 August 2014

16 August 2014