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Changes as of 3 July 2025 14:21. (RSS Feed)

20 November 2014

(diff) (history) 01:23 Pacbio Data . . (+192) . . admin (Comments | Contribs) (→Third Set)
(diff) (history) 01:22 Pacbio Data . . (+193) . . admin (Comments | Contribs) (→Second Set)
(diff) (history) 01:20 Pacbio Data . . (+214) . . admin (Comments | Contribs) (→First Set)
(diff) (history) 01:12 Pacbio Data . . (+190) . . admin (Comments | Contribs) (→Third Set)
(diff) (history) 01:10 Pacbio Data . . (+190) . . admin (Comments | Contribs) (→Second Set)
(diff) (history) 01:07 Pacbio Data . . (+213) . . admin (Comments | Contribs) (→First Set)
(diff) (history) 01:05 Pacbio Data . . (+191) . . admin (Comments | Contribs) (→Third Set)
(diff) (history) 01:03 Pacbio Data . . (-1) . . admin (Comments | Contribs) (→First Set)
(diff) (history) 01:01 Pacbio Data . . (+191) . . admin (Comments | Contribs) (→Second Set)
(diff) (history) 01:00 Pacbio Data . . (+214) . . admin (Comments | Contribs) (→First Set)

4 September 2014

(diff) (history) 01:23 E. coli . . (-264) . . admin (Comments | Contribs) (→Fractional data)
(diff) (history) 01:22 E. coli . . (-1) . . admin (Comments | Contribs) (→Fractional data)
(diff) (history) 01:22 E. coli . . (+2) . . admin (Comments | Contribs) (→Fractional data)
(diff) (history) 01:21 E. coli . . (+3) . . admin (Comments | Contribs) (→Fractional data)
(diff) (history) 01:21 E. coli . . (+676) . . admin (Comments | Contribs) (→Fractional data)
(diff) (history) 01:15 E. coli . . (+4) . . admin (Comments | Contribs) (→Fractional data)
(diff) (history) 01:15 E. coli . . (+263) . . admin (Comments | Contribs) (→Fractional data)

30 August 2014

(diff) (history) 01:59 SSPACE . . (+2,161) . . admin (Comments | Contribs) (→Evaluation)

29 August 2014

(diff) (history) 01:50 E. coli . . (-1) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 01:49 E. coli . . (-2) . . admin (Comments | Contribs) (→Evaluation)

26 August 2014

(diff) (history) 03:00 Home . . (-54) . . admin (Comments | Contribs) (→Workflow)
(Upload log) 02:58 . . admin (Comments | Contribs) File File:Figure 1.png uploaded
(diff) (history) 02:58 Home . . (+16) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 02:58 Home . . (+22) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 02:50 Home . . (+578) . . admin (Comments | Contribs)
(diff) (history) 02:17 Home . . (-21) . . admin (Comments | Contribs)
(Upload log) 02:16 . . admin (Comments | Contribs) File File:Workflow.jpg uploaded
(diff) (history) 02:13 Home . . (+24) . . admin (Comments | Contribs)

22 August 2014

(diff) (history) 02:06 PBcR pipeline . . (+82) . . admin (Comments | Contribs)
(diff) (history) 02:04 HGAP . . (+6) . . admin (Comments | Contribs) (→Postprocess by discarding lower-case bases)
(Upload log) 01:59 . . admin (Comments | Contribs) File File:HGAP3 D9.pdf uploaded
(diff) (history) 01:56 HGAP . . (+1) . . admin (Comments | Contribs) (→Postprocess by discarding lower-case bases)
(diff) (history) 01:48 HGAP . . (+91) . . admin (Comments | Contribs) (→HGAP 3.0 with Dataset 9)
(Upload log) 01:45 . . admin (Comments | Contribs) File File:hgap3 d9 all.fa uploaded
(diff) (history) 01:44 HGAP . . (0) . . admin (Comments | Contribs) (→Postprocess by discarding lower-case bases)
(diff) (history) 01:36 Home . . (-4) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 01:35 Home . . (-9) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 01:34 PBcR pipeline . . (+4) . . admin (Comments | Contribs) (→wgs-8.2 Performance)
(diff) (history) 01:34 PBcR pipeline . . (+8) . . admin (Comments | Contribs) (→Performance)
(diff) (history) 01:18 HGAP . . (+34) . . admin (Comments | Contribs) (→HGAP 3.0 with Dataset 9)
(diff) (history) 01:17 HGAP . . (+15) . . admin (Comments | Contribs) (→HGAP 3.0)
(diff) (history) 01:16 HGAP . . (+11) . . admin (Comments | Contribs) (→Postprocess by discarding lower-case bases)
(diff) (history) 01:15 HGAP . . (+1,701) . . admin (Comments | Contribs) (→Postprocess by discarding lower-case bases)
(diff) (history) 01:11 HGAP . . (+4) . . admin (Comments | Contribs) (→Postprocess by discarding lower-case bases)
(diff) (history) 00:58 HGAP . . (+38) . . admin (Comments | Contribs) (→Dataset 9 (E. coli K-12, P4-C2 chemistry, 20 Kbp, 1 SMRT cell))
(diff) (history) 00:46 PBcR pipeline . . (+15) . . admin (Comments | Contribs) (→Performance)
(diff) (history) 00:30 PBcR pipeline . . (-5) . . admin (Comments | Contribs) (→Performance)
(diff) (history) 00:29 PBcR pipeline . . (-5) . . admin (Comments | Contribs) (→Performance)
(Upload log) 00:28 . . admin (Comments | Contribs) File File:pbcr pipeline d9.pdf uploaded
(Upload log) 00:12 . . admin (Comments | Contribs) File File:pbcr pipeline d9.fa uploaded
(diff) (history) 00:06 PBcR pipeline . . (+115) . . admin (Comments | Contribs)
(diff) (history) 00:05 PBcR pipeline . . (-1) . . admin (Comments | Contribs)
(diff) (history) 00:05 PBcR pipeline . . (+118) . . admin (Comments | Contribs) (→Dataset 9 (E. coli K-12, P4-C2 chemistry, 20 Kbp, 1 SMRT cell))
(diff) (history) 00:00 PBcR pipeline . . (+20) . . admin (Comments | Contribs) (→Dataset 9 (E. coli K-12, P4-C2 chemistry, 20 Kbp, 1 SMRT cell))

21 August 2014

(diff) (history) 23:59 PBcR pipeline . . (+863) . . admin (Comments | Contribs) (→Dataset 9 (E. coli K-12, P4-C2 chemistry, 20 Kbp, 1 SMRT cell))

19 August 2014

(Upload log) 21:18 . . admin (Comments | Contribs) File File:sspace summary.pdf uploaded
(Upload log) 21:17 . . admin (Comments | Contribs) File File:spades hb summary.pdf uploaded
(Upload log) 21:17 . . admin (Comments | Contribs) File File:spades d3 nopac summary.pdf uploaded
(Upload log) 21:16 . . admin (Comments | Contribs) File File:spades d3 summary.pdf uploaded
(Upload log) 21:16 . . admin (Comments | Contribs) File File:spades d2 nopac summary.pdf uploaded
(Upload log) 21:16 . . admin (Comments | Contribs) File File:spades d2 summary.pdf uploaded
(Upload log) 21:09 . . admin (Comments | Contribs) File File:spades d1 nopac summary.pdf uploaded
(Upload log) 21:08 . . admin (Comments | Contribs) File File:spades d1 r2cat.pdf uploaded
(diff) (history) 21:07 SPAdes - D1 and D5 . . (-2) . . admin (Comments | Contribs) (→Evaluation)
(Upload log) 20:48 . . admin (Comments | Contribs) File File:spades d1 summary.pdf uploaded
(Upload log) 20:45 . . admin (Comments | Contribs) File File:sspace.pdf uploaded
(Upload log) 20:45 . . admin (Comments | Contribs) File File:spade hybrid.pdf uploaded
(Upload log) 20:45 . . admin (Comments | Contribs) File File:spdes D3 nopac.pdf uploaded
(Upload log) 20:45 . . admin (Comments | Contribs) File File:spades D3.pdf uploaded
(Upload log) 20:45 . . admin (Comments | Contribs) File File:spades D2 nopac,pdf.pdf uploaded
(Upload log) 20:44 . . admin (Comments | Contribs) File File:spades D2.pdf uploaded
(Upload log) 20:16 . . admin (Comments | Contribs) File File:spades D1 nopac.pdf uploaded
(Upload log) 20:14 . . admin (Comments | Contribs) File File:spades d1.pdf uploaded
(diff) (history) 02:35 Home . . (+78) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 02:34 Home . . (+6) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 02:33 Home . . (+2) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 02:32 Home . . (+2) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 02:32 Home . . (+2) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 02:30 HGAP . . (0) . . admin (Comments | Contribs) (→Hierarchical genome-assembly process)
(diff) (history) 02:30 HGAP . . (+3) . . admin (Comments | Contribs) (→Hierarchical genome-assembly process)
(diff) (history) 02:27 Home . . (0) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 02:27 Home . . (+5) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 02:25 Home . . (+78) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 02:24 Home . . (-4) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 02:23 Home . . (+4) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 02:22 Home . . (+56) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 02:20 Home . . (+133) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 02:18 Home . . (+32) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 02:17 Home . . (-2) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 02:16 Home . . (+60) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 02:16 Home . . (-136) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 02:15 Home . . (+136) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 00:20 SSPACE . . (+70) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 00:20 SPAdes - hybrid . . (+73) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 00:19 SSPACE . . (+28) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 00:19 SPAdes - hybrid . . (+6) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 00:18 SPAdes - hybrid . . (+28) . . admin (Comments | Contribs) (→Evaluation)

18 August 2014

(diff) (history) 22:02 PBcR pipeline . . (+21) . . admin (Comments | Contribs) (→Dataset 8 (P. heparinus DSM1279, 7 SMRT cells))
(diff) (history) 22:01 PBcR pipeline . . (+21) . . admin (Comments | Contribs) (→Dataset 9 (E. coli K-12, P4-C2 chemistry, 20 Kbp, 1 SMRT cell))
(diff) (history) 22:01 PBcR pipeline . . (+21) . . admin (Comments | Contribs) (→Dataset 7, (M. ruber DSM1279, 4 SMRT cells))
(diff) (history) 22:01 PBcR pipeline . . (+21) . . admin (Comments | Contribs) (→Dataset 6 (E.coli K-12 MG1655, 8 SMRT cells))
(diff) (history) 22:00 PBcR pipeline . . (+21) . . admin (Comments | Contribs) (→Dataset 5 (E. coli K-12 MG1655, 17 SMRT cells))
(diff) (history) 21:59 HGAP . . (+11) . . admin (Comments | Contribs) (→Postprocess by discarding lower-case bases)
(diff) (history) 21:58 HGAP . . (+11) . . admin (Comments | Contribs) (→Postprocess by discarding lower-case bases)
(diff) (history) 21:58 HGAP . . (+11) . . admin (Comments | Contribs) (→Postprocess by discarding lower-case bases)
(diff) (history) 21:58 HGAP . . (+11) . . admin (Comments | Contribs) (→Postprocess by discarding lower-case bases)
(diff) (history) 21:57 HGAP . . (+11) . . admin (Comments | Contribs) (→Postprocess by discarding lower-case bases)
(diff) (history) 21:54 SSPACE . . (+10) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:52 SSPACE . . (+14) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:51 SSPACE . . (+107) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:48 SSPACE . . (+60) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:47 SPAdes - hybrid . . (+8) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:46 SPAdes - hybrid . . (+124) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:43 SPAdes - hybrid . . (+58) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:43 SPAdes - D3 . . (+126) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:42 SPAdes - D2 . . (+126) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:41 SPAdes - D1 and D5 . . (+65) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:41 SPAdes - D1 and D5 . . (+59) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:39 RunCA . . (+14) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:38 PacBioToCA . . (+28) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:37 Read Depths . . (+42) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:36 Read Depths . . (+14) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:35 S. pneumoniae . . (0) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:35 R. sphaeroides . . (0) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:32 E. coli . . (0) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:23 E. coli . . (0) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:21 E. coli . . (0) . . admin (Comments | Contribs) (→Evaluation)

16 August 2014

(Upload log) 03:24 . . admin (Comments | Contribs) File File:pbcr d9 all.fa uploaded
(Upload log) 03:24 . . admin (Comments | Contribs) File File:pbcr d8 rg4 3.fa uploaded
(Upload log) 03:24 . . admin (Comments | Contribs) File File:pbcr d8 rg4 2.fa uploaded
(Upload log) 03:23 . . admin (Comments | Contribs) File File:pbcr d8 rg4 1.fa uploaded
(Upload log) 03:23 . . admin (Comments | Contribs) File File:pbcr d8 all.fa uploaded
(Upload log) 03:23 . . admin (Comments | Contribs) File File:pbcr d7 all.fa uploaded
(Upload log) 03:22 . . admin (Comments | Contribs) File File:pbcr d6 rg6 3.fa uploaded
(Upload log) 03:22 . . admin (Comments | Contribs) File File:pbcr d6 rg6 2.fa uploaded
(Upload log) 03:22 . . admin (Comments | Contribs) File File:pbcr d6 rg6 1.fa uploaded
(Upload log) 03:22 . . admin (Comments | Contribs) File File:pbcr d6 rg4 3.fa uploaded
(Upload log) 03:22 . . admin (Comments | Contribs) File File:pbcr d6 rg4 2.fa uploaded
(Upload log) 03:21 . . admin (Comments | Contribs) File File:pbcr d6 rg4 1.fa uploaded
(Upload log) 03:21 . . admin (Comments | Contribs) File File:pbcr d6 all.fa uploaded
(Upload log) 03:21 . . admin (Comments | Contribs) File File:pbcr d5 rg8 3.fa uploaded
(Upload log) 03:21 . . admin (Comments | Contribs) File File:pbcr d5 rg8 2.fa uploaded
(Upload log) 03:21 . . admin (Comments | Contribs) File File:pbcr d5 rg8 1.fa uploaded
(Upload log) 03:20 . . admin (Comments | Contribs) File File:pbcr d5 rg6 3.fa uploaded
(Upload log) 03:20 . . admin (Comments | Contribs) File File:pbcr d5 rg6 2.fa uploaded
(Upload log) 03:20 . . admin (Comments | Contribs) File File:pbcr d5 rg6 1.fa uploaded
(Upload log) 03:20 . . admin (Comments | Contribs) File File:pbcr d5 rg4 3.fa uploaded
(Upload log) 03:20 . . admin (Comments | Contribs) File File:pbcr d5 rg4 2.fa uploaded
(Upload log) 03:19 . . admin (Comments | Contribs) File File:pbcr d5 rg4 2.fa uploaded
(Upload log) 03:19 . . admin (Comments | Contribs) File File:pbcr d5 rg4 1.fa uploaded
(Upload log) 03:19 . . admin (Comments | Contribs) File File:pbcr d5 all.fa uploaded
(Upload log) 03:17 . . admin (Comments | Contribs) File File:spd sspace p4c2.fasta uploaded
(Upload log) 03:17 . . admin (Comments | Contribs) File File:spd sspace 17cell.fasta uploaded
(Upload log) 03:17 . . admin (Comments | Contribs) File File:spd sspace 4cell.fasta uploaded
(Upload log) 03:17 . . admin (Comments | Contribs) File File:spd sspace 3cell.fasta uploaded
(Upload log) 03:17 . . admin (Comments | Contribs) File File:spd sspace 2cell.fasta uploaded
(Upload log) 03:16 . . admin (Comments | Contribs) File File:spd sspace 1cell.fasta uploaded
(diff) (history) 03:16 SSPACE . . (+198) . . admin (Comments | Contribs)
(diff) (history) 03:14 SSPACE . . (+26) . . admin (Comments | Contribs)
(Upload log) 03:13 . . admin (Comments | Contribs) File File:spd hb p4c2.fasta uploaded
(Upload log) 03:13 . . admin (Comments | Contribs) File File:spd hb 17cell.fasta uploaded
(Upload log) 03:12 . . admin (Comments | Contribs) File File:spd hb 4cell.fasta uploaded
(Upload log) 03:12 . . admin (Comments | Contribs) File File:spd hb 3cell.fasta uploaded
(Upload log) 03:12 . . admin (Comments | Contribs) File File:spd hb 2cell.fasta uploaded
(Upload log) 03:12 . . admin (Comments | Contribs) File File:spd hb 1cell.fasta uploaded
(diff) (history) 03:12 SPAdes - hybrid . . (+174) . . admin (Comments | Contribs)
(Upload log) 03:10 . . admin (Comments | Contribs) File File:spd miseq.fasta uploaded
(diff) (history) 03:10 SPAdes - hybrid . . (+4) . . admin (Comments | Contribs)
(diff) (history) 03:09 SPAdes - hybrid . . (+22) . . admin (Comments | Contribs) (→Evaluation)
(Upload log) 03:08 . . admin (Comments | Contribs) File File:spd d3 raw nopac.fasta uploaded
(Upload log) 03:08 . . admin (Comments | Contribs) File File:spd d3 web nopac.fasta uploaded
(Upload log) 03:07 . . admin (Comments | Contribs) File File:spd d3 raw.fasta uploaded
(Upload log) 03:07 . . admin (Comments | Contribs) File File:spd d3 web.fasta uploaded
(Upload log) 03:07 . . admin (Comments | Contribs) File File:spd d2 raw nopac.fasta uploaded
(Upload log) 03:07 . . admin (Comments | Contribs) File File:spd d2 web nopac.fasta uploaded
(Upload log) 03:06 . . admin (Comments | Contribs) File File:spd d2 raw.fasta uploaded
(Upload log) 03:06 . . admin (Comments | Contribs) File File:spd d2 web.fasta uploaded
(Upload log) 03:06 . . admin (Comments | Contribs) File File:spd d1 raw nopac.fasta uploaded
(Upload log) 03:06 . . admin (Comments | Contribs) File File:spd d1 web nopac.fasta uploaded
(Upload log) 03:06 . . admin (Comments | Contribs) File File:spd d1 raw d5 single.fasta uploaded
(Upload log) 03:05 . . admin (Comments | Contribs) File File:spd d1 raw.fasta uploaded
(Upload log) 03:05 . . admin (Comments | Contribs) File File:spd d1 web.fasta uploaded
(diff) (history) 02:26 Home . . (-3) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 02:21 SPAdes - D2 . . (-3) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 02:16 SPAdes - D2 . . (+2) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 02:14 SPAdes - D1 and D5 . . (+2) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 02:11 SPAdes - D1 and D5 . . (+1) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 02:11 SPAdes - D1 and D5 . . (+1) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 01:41 SPAdes - D1 and D5 . . (+2) . . admin (Comments | Contribs)
(diff) (history) 01:38 SSPACE . . (-1) . . admin (Comments | Contribs)
(diff) (history) 01:36 RunCA . . (0) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 01:36 PacBioToCA . . (0) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 01:36 Read Depths . . (0) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 01:34 RunCA . . (0) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 01:25 PacBioToCA . . (0) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 01:22 PacBioToCA . . (0) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 01:03 Read Depths . . (+2) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 00:57 Read Depths . . (-2) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 00:50 Read Depths . . (0) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 00:42 Read Depths . . (0) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 00:29 PBcR pipeline . . (+1) . . admin (Comments | Contribs) (→Performance)
(diff) (history) 00:29 PBcR pipeline . . (+4) . . admin (Comments | Contribs) (→Performance)
(diff) (history) 00:29 PBcR pipeline . . (+1) . . admin (Comments | Contribs) (→Performance)
(diff) (history) 00:28 PBcR pipeline . . (+7) . . admin (Comments | Contribs) (→Performance)
(diff) (history) 00:28 PBcR pipeline . . (+10) . . admin (Comments | Contribs) (→Performance)
(diff) (history) 00:26 PBcR pipeline . . (-1) . . admin (Comments | Contribs) (→Performance)
(diff) (history) 00:25 PBcR pipeline . . (-12) . . admin (Comments | Contribs) (→Performance)
(diff) (history) 00:22 PBcR pipeline . . (0) . . admin (Comments | Contribs) (→Performance)
(diff) (history) 00:14 PBcR pipeline . . (-1) . . admin (Comments | Contribs) (→Performance)
(diff) (history) 00:10 PBcR pipeline . . (-6) . . admin (Comments | Contribs) (→Performance)

15 August 2014

(diff) (history) 22:00 PBcR pipeline . . (-7) . . admin (Comments | Contribs) (→Performance)
(diff) (history) 20:13 PBcR pipeline . . (-11) . . admin (Comments | Contribs) (→Self-Correction Assembly)
(diff) (history) 20:13 PBcR pipeline . . (+12,413) . . admin (Comments | Contribs) n
(diff) (history) 20:13 JAMWiki:Sidebar . . (+10) . . admin (Comments | Contribs)
(diff) (history) 20:12 JAMWiki:Sidebar . . (+10) . . admin (Comments | Contribs)
(diff) (history) 20:09 HGAP . . (0) . . admin (Comments | Contribs) (→Postprocess by discarding lower-case bases)
(diff) (history) 20:08 HGAP . . (-4) . . admin (Comments | Contribs) (→Postprocess by discarding lower-case bases)
(diff) (history) 20:03 HGAP . . (0) . . admin (Comments | Contribs) (→Postprocess by discarding lower-case bases)
(diff) (history) 20:00 HGAP . . (+2) . . admin (Comments | Contribs) (→Postprocess by discarding lower-case bases)
(diff) (history) 19:54 HGAP . . (-9) . . admin (Comments | Contribs) (→Postprocess by discarding lower-case bases)
(diff) (history) 19:47 HGAP . . (-1) . . admin (Comments | Contribs) (→Postprocess by discarding lower-case bases)
(diff) (history) 19:42 SCA . . (-14) . . admin (Comments | Contribs)
(diff) (history) 19:41 Home . . (+22) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 19:40 Home . . (0) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 19:40 Home . . (+150) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 19:38 Home . . (+1) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 19:37 Home . . (+35) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 19:37 Home . . (+222) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 19:34 Home . . (-3) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 19:33 Home . . (+75) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 19:30 Home . . (+22) . . admin (Comments | Contribs) (→Completing bacterial genome assemblies: strategy and performance comparisons)
(diff) (history) 19:30 Home . . (+50) . . admin (Comments | Contribs) (→Completing microbial genome assemblies: strategy and performance comparisons)
(diff) (history) 06:09 S. pneumoniae . . (-8) . . admin (Comments | Contribs)
(diff) (history) 03:45 S. pneumoniae . . (+1) . . admin (Comments | Contribs)
(diff) (history) 03:32 S. pneumoniae . . (0) . . admin (Comments | Contribs)
(diff) (history) 03:30 E. coli . . (0) . . admin (Comments | Contribs)
(diff) (history) 03:30 R. sphaeroides . . (0) . . admin (Comments | Contribs)
(diff) (history) 03:18 R. sphaeroides . . (-7) . . admin (Comments | Contribs)
(diff) (history) 03:04 E. coli . . (-24) . . admin (Comments | Contribs)
(diff) (history) 02:50 SPAdes - hybrid . . (-43) . . admin (Comments | Contribs)
(diff) (history) 02:48 SPAdes - D3 . . (+1) . . admin (Comments | Contribs)
(diff) (history) 02:48 SPAdes - D3 . . (0) . . admin (Comments | Contribs)
(diff) (history) 02:47 SPAdes - hybrid . . (0) . . admin (Comments | Contribs)
(diff) (history) 02:47 SPAdes - hybrid . . (0) . . admin (Comments | Contribs)
(diff) (history) 02:45 SPAdes - hybrid . . (-8) . . admin (Comments | Contribs)
(diff) (history) 02:45 SPAdes - hybrid . . (-29) . . admin (Comments | Contribs)
(diff) (history) 02:40 SPAdes - hybrid . . (-2) . . admin (Comments | Contribs)
(diff) (history) 02:39 SSPACE . . (+49) . . admin (Comments | Contribs)
(diff) (history) 02:38 SPAdes - hybrid . . (-38) . . admin (Comments | Contribs)
(diff) (history) 02:37 SPAdes - hybrid . . (+2,598) . . admin (Comments | Contribs) n
(diff) (history) 02:35 SSPACE . . (+16) . . admin (Comments | Contribs)
(diff) (history) 02:35 JAMWiki:Sidebar . . (+31) . . admin (Comments | Contribs)
(diff) (history) 02:33 SPAdes - D3 . . (+20) . . admin (Comments | Contribs)
(diff) (history) 02:32 SPAdes - D2 . . (+20) . . admin (Comments | Contribs)
(diff) (history) 02:32 SPAdes - D1 and D5 . . (+19) . . admin (Comments | Contribs)
(diff) (history) 02:32 SSPACE . . (+1) . . admin (Comments | Contribs)
(diff) (history) 02:32 SSPACE . . (+139) . . admin (Comments | Contribs)
(diff) (history) 02:12 SPAdes - D1 and D5 . . (-1) . . admin (Comments | Contribs)
(diff) (history) 02:12 SPAdes - D2 . . (+1) . . admin (Comments | Contribs)
(diff) (history) 02:12 SPAdes - D3 . . (+116) . . admin (Comments | Contribs)
(diff) (history) 02:11 SPAdes - D2 . . (+115) . . admin (Comments | Contribs)
(diff) (history) 02:11 SPAdes - D1 and D5 . . (+1) . . admin (Comments | Contribs)
(diff) (history) 02:00 SPAdes - D1 and D5 . . (+162) . . admin (Comments | Contribs)
(diff) (history) 01:59 SPAdes - D3 . . (+96) . . admin (Comments | Contribs)
(diff) (history) 01:59 SPAdes - D2 . . (+96) . . admin (Comments | Contribs)
(diff) (history) 01:57 SPAdes - D1 and D5 . . (+141) . . admin (Comments | Contribs)
(diff) (history) 01:51 SSPACE . . (-2,111) . . admin (Comments | Contribs)
(diff) (history) 01:46 SSPACE . . (+25) . . admin (Comments | Contribs)
(diff) (history) 01:33 SSPACE . . (-26) . . admin (Comments | Contribs)
(diff) (history) 01:32 SSPACE . . (+20) . . admin (Comments | Contribs)
(diff) (history) 01:31 SSPACE . . (-92) . . admin (Comments | Contribs)
(diff) (history) 01:21 SSPACE . . (+4) . . admin (Comments | Contribs)
(diff) (history) 01:20 SSPACE . . (+12) . . admin (Comments | Contribs)
(diff) (history) 01:20 SSPACE . . (+4) . . admin (Comments | Contribs)
(diff) (history) 01:20 SSPACE . . (+280) . . admin (Comments | Contribs)
(diff) (history) 01:17 SSPACE . . (+138) . . admin (Comments | Contribs)
(diff) (history) 00:55 SPAdes - D3 . . (+3) . . admin (Comments | Contribs)
(diff) (history) 00:45 SPAdes - D3 . . (-10) . . admin (Comments | Contribs)
(diff) (history) 00:01 SSPACE . . (0) . . admin (Comments | Contribs)
(diff) (history) 00:00 R. sphaeroides . . (+4) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 00:00 S. pneumoniae . . (+4) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 00:00 SPAdes - D2 . . (+4) . . admin (Comments | Contribs)

14 August 2014

(diff) (history) 23:59 SPAdes - D3 . . (+4) . . admin (Comments | Contribs)
(diff) (history) 23:59 SPAdes - D3 . . (+18) . . admin (Comments | Contribs)
(diff) (history) 23:58 SPAdes - D3 . . (-65) . . admin (Comments | Contribs)
(diff) (history) 23:57 SPAdes - D1 and D5 . . (-1) . . admin (Comments | Contribs)
(diff) (history) 23:57 SPAdes - D3 . . (-1) . . admin (Comments | Contribs)
(diff) (history) 23:57 SPAdes - D3 . . (+2) . . admin (Comments | Contribs)
(diff) (history) 23:56 SPAdes - D3 . . (+54) . . admin (Comments | Contribs)
(diff) (history) 23:55 SPAdes - D1 and D5 . . (+18) . . admin (Comments | Contribs)
(diff) (history) 23:54 SPAdes - D1 and D5 . . (+135) . . admin (Comments | Contribs)
(diff) (history) 23:53 E. coli . . (+4) . . admin (Comments | Contribs)
(diff) (history) 22:08 SPAdes - D2 . . (+7) . . admin (Comments | Contribs)
(diff) (history) 22:07 SPAdes - D2 . . (-71) . . admin (Comments | Contribs)
(diff) (history) 22:07 SPAdes - D2 . . (-7) . . admin (Comments | Contribs)
(diff) (history) 22:07 SPAdes - D1 and D5 . . (-18) . . admin (Comments | Contribs)
(diff) (history) 22:06 SPAdes - D2 . . (+5) . . admin (Comments | Contribs)
(diff) (history) 22:05 SPAdes - D2 . . (+4) . . admin (Comments | Contribs)
(diff) (history) 22:00 SPAdes - D2 . . (+44) . . admin (Comments | Contribs)
(diff) (history) 21:59 SPAdes - D2 . . (-1) . . admin (Comments | Contribs)
(diff) (history) 21:59 SPAdes - D2 . . (+42) . . admin (Comments | Contribs)
(diff) (history) 21:49 JAMWiki:Sidebar . . (+12) . . admin (Comments | Contribs)
(diff) (history) 21:49 JAMWiki:Sidebar . . (-12) . . admin (Comments | Contribs)
(diff) (history) 21:48 JAMWiki:Sidebar . . (+12) . . admin (Comments | Contribs)
(diff) (history) 21:47 JAMWiki:Sidebar . . (+8) . . admin (Comments | Contribs)
(diff) (history) 21:47 JAMWiki:Sidebar . . (+4) . . admin (Comments | Contribs)
(diff) (history) 21:46 S. pneumoniae . . (+4) . . admin (Comments | Contribs)
(diff) (history) 21:46 R. sphaeroides . . (+4) . . admin (Comments | Contribs)
(diff) (history) 21:46 SPAdes - D1 and D5 . . (+9) . . admin (Comments | Contribs)
(diff) (history) 21:45 E. coli . . (+4) . . admin (Comments | Contribs)
(diff) (history) 21:43 SPAdes - D1 and D5 . . (+5) . . admin (Comments | Contribs)
(diff) (history) 21:40 SPAdes - D1 and D5 . . (+9) . . admin (Comments | Contribs)
(diff) (history) 21:35 SPAdes - D1 and D5 . . (+151) . . admin (Comments | Contribs)
(diff) (history) 21:26 SPAdes - D1 and D5 . . (+17) . . admin (Comments | Contribs)
(diff) (history) 21:25 SPAdes - D1 and D5 . . (+16) . . admin (Comments | Contribs)
(diff) (history) 21:24 SPAdes - D1 and D5 . . (+12) . . admin (Comments | Contribs)
(diff) (history) 21:23 SPAdes - D1 and D5 . . (+15) . . admin (Comments | Contribs)
(diff) (history) 21:21 SPAdes - D1 and D5 . . (+80) . . admin (Comments | Contribs)
(diff) (history) 20:55 SPAdes - D1 and D5 . . (+83) . . admin (Comments | Contribs)
(diff) (history) 20:54 SPAdes - D1 and D5 . . (+2,707) . . admin (Comments | Contribs) n
(diff) (history) 20:54 JAMWiki:Sidebar . . (+7) . . admin (Comments | Contribs)
(diff) (history) 20:53 JAMWiki:Sidebar . . (-7) . . admin (Comments | Contribs)
(diff) (history) 20:52 JAMWiki:Sidebar . . (-19) . . admin (Comments | Contribs)
(diff) (history) 20:49 SSPACE . . (-10,606) . . admin (Comments | Contribs)
(diff) (history) 03:28 SSPACE . . (+14,794) . . admin (Comments | Contribs) n
(diff) (history) 02:37 SPAdes - D5 . . (-9) . . admin (Comments | Contribs)
(diff) (history) 02:36 SPAdes - D5 . . (+1,301) . . admin (Comments | Contribs) n
(diff) (history) 02:17 JAMWiki:Sidebar . . (0) . . admin (Comments | Contribs)
(diff) (history) 02:13 SPAdes - D3 . . (+2,898) . . admin (Comments | Contribs) n
(diff) (history) 02:09 SPAdes - D2 . . (-29) . . admin (Comments | Contribs)
(diff) (history) 02:08 SPAdes - D2 . . (+2,950) . . admin (Comments | Contribs) n
(diff) (history) 02:04 SPAdes - D1 . . (+2,707) . . admin (Comments | Contribs) n
(diff) (history) 02:03 JAMWiki:Sidebar . . (+95) . . admin (Comments | Contribs)
(diff) (history) 02:01 JAMWiki:Sidebar . . (0) . . admin (Comments | Contribs)
(diff) (history) 01:59 JAMWiki:Sidebar . . (+2) . . admin (Comments | Contribs)
(diff) (history) 01:58 SPAde . . (-8) . . admin (Comments | Contribs)
(diff) (history) 01:56 SPAde . . (-134) . . admin (Comments | Contribs)
(diff) (history) 01:52 SPAde . . (-622) . . admin (Comments | Contribs)
(diff) (history) 01:50 SPAde . . (-2) . . admin (Comments | Contribs)
(diff) (history) 01:50 SPAde . . (-189) . . admin (Comments | Contribs)
(diff) (history) 01:48 SPAde . . (-391) . . admin (Comments | Contribs)
(diff) (history) 01:39 SPAde . . (+4,053) . . admin (Comments | Contribs) n
(diff) (history) 01:32 JAMWiki:Sidebar . . (-11) . . admin (Comments | Contribs)
(diff) (history) 01:22 Data-SPAdes . . (+4,053) . . admin (Comments | Contribs) n
(diff) (history) 00:54 JAMWiki:Sidebar . . (+4) . . admin (Comments | Contribs)
(diff) (history) 00:32 JAMWiki:Sidebar . . (0) . . admin (Comments | Contribs)
(diff) (history) 00:31 JAMWiki:Sidebar . . (+14) . . admin (Comments | Contribs)
(diff) (history) 00:30 JAMWiki:Sidebar . . (+32) . . admin (Comments | Contribs)
(diff) (history) 00:23 JAMWiki:Sidebar . . (+2) . . admin (Comments | Contribs)
(diff) (history) 00:15 JAMWiki:Sidebar . . (+33) . . admin (Comments | Contribs)

1 August 2014

(diff) (history) 00:09 RunCA . . (+18) . . admin (Comments | Contribs)
(Upload log) 00:05 . . admin (Comments | Contribs) File File:w 25X runCA1.fa uploaded
(Upload log) 00:04 . . admin (Comments | Contribs) File File:w 25X runCA2.fa uploaded

13 May 2014

(diff) (history) 03:13 RunCA . . (+267) . . admin (Comments | Contribs)
(diff) (history) 03:12 PacBioToCA . . (+268) . . admin (Comments | Contribs)
(diff) (history) 02:47 S. pneumoniae . . (+35) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 02:37 R. sphaeroides . . (+27) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 02:25 E. coli . . (+20) . . admin (Comments | Contribs) (→Evaluation)

12 May 2014

(diff) (history) 21:39 S. pneumoniae . . (+11) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:38 R. sphaeroides . . (+13) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:37 E. coli . . (+12) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:19 S. pneumoniae . . (+3) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:18 R. sphaeroides . . (0) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:18 E. coli . . (+3) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:13 S. pneumoniae . . (+182) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:12 R. sphaeroides . . (+173) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:11 E. coli . . (+82) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:11 E. coli . . (+42) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:10 E. coli . . (+6) . . admin (Comments | Contribs) (→Evaluation)
(diff) (history) 21:09 E. coli . . (+38) . . admin (Comments | Contribs) (→Evaluation)

9 May 2014

(diff) (history) 02:37 SCA . . (+106) . . admin (Comments | Contribs) (→Self-Correction Assembly)
(diff) (history) 02:36 SCA . . (+7) . . admin (Comments | Contribs) (→Self-Correction Assembly)
(diff) (history) 02:36 SCA . . (+5) . . admin (Comments | Contribs) (→Self-Correction Assembly)
(diff) (history) 02:35 SCA . . (+53) . . admin (Comments | Contribs) (→Self-Correction Assembly)
(diff) (history) 02:26 Read Depths . . (+14) . . admin (Comments | Contribs) (→Hybrid error correction)
(Upload log) 02:25 . . admin (Comments | Contribs) File File:pacbio.spec uploaded
(diff) (history) 02:25 Read Depths . . (+5) . . admin (Comments | Contribs) (→Hybrid error correction)
(diff) (history) 02:24 Read Depths . . (0) . . admin (Comments | Contribs) (→Hybrid error correction)
(diff) (history) 02:22 Data . . (+1) . . admin (Comments | Contribs) (→Raw)

8 May 2014

(diff) (history) 21:40 Home . . (0) . . admin (Comments | Contribs) (→Completing microbial genome assemblies: strategy and performance comparisons)
(diff) (history) 21:40 Home . . (0) . . admin (Comments | Contribs) (→Completing microbial genome assemblies: strategy and performance comparisons)
(diff) (history) 21:40 Home . . (+44) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 21:39 Home . . (+21) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 21:39 Home . . (+1) . . admin (Comments | Contribs) (→Completing microbial genome assemblies: strategy and performance comparisons)
(diff) (history) 21:38 Home . . (-2) . . admin (Comments | Contribs) (→Completing microbial genome assemblies: strategy and performance comparisons)
(diff) (history) 21:38 Home . . (+134) . . admin (Comments | Contribs) (→Completing microbial genome assemblies: strategy and performance comparisons)
(diff) (history) 20:22 JAMWiki:Sidebar . . (-299) . . admin (Comments | Contribs)

30 April 2014

(diff) (history) 20:08 Home . . (+22) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 20:07 Home . . (+182) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 20:03 Home . . (+8) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 20:02 Home . . (+9) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 20:01 Home . . (+6) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 19:59 Home . . (+307) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 19:57 Home . . (+215) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 19:53 Home . . (-14) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 19:52 Home . . (0) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 19:52 Home . . (+2) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 19:51 Home . . (+194) . . admin (Comments | Contribs)
(diff) (history) 19:49 Home . . (+87) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 19:47 Home . . (+66) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 19:46 Home . . (-2) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 19:46 Home . . (+2) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 19:46 Home . . (+90) . . admin (Comments | Contribs) (→Datasets employed in this study)
(diff) (history) 19:44 Home . . (+77) . . admin (Comments | Contribs) (→Datasets employed in this study)

Recent Changes

12 December 2014

11 December 2014

8 December 2014

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30 August 2014

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22 August 2014

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19 August 2014

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